Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919564.1_cds_XP_016468754.1_61358
CDS Infomation

[gene=LOC107791244] [db_xref=GeneID:107791244] [protein=phosphomevalonate kinase-like] [protein_id=XP_016468754.1] [location=complement(join(34740..35006,35401..35523,36764..36991,37626..37730,39260..39646,40721..40773,40891..41000,41444..41541,41931..42081,42179..42186))] [gbkey=CDS]
Sequence

ATGGCTGTCGTGGCCTCTGCTCCTGGAAAGGTTCTAATGACTGGAGGTTATCTTGTTTTG
GAGAGGCCAAATGCTGGTATTGTACTGAGTACAAATGCTCGTTTTTATGCTATTGTGAAG
CCACTTTACGAGGAAATTAAACCTGAAAGTTGGGCATGGGCATGGGCAGATGTTAAATTG
ACTTCTCCTCAGATGGCCAGAGAAACTATGTACAAATTGTCTCTTAAGCATTTAAAACTT
CAAGCTGTCTCTTCCAGTGAATCAAGAAACCCCTTCGTAGAACATGCAGTGGAATATGCC
ATAGCAGCAGCCCATGCAACATTTGACAAAGATAAGACGGATATATTACAGAAACTACTT
CTGAGAGGTCTTGATATAACAATCTTGGGTTGCAATGAGTTCTATTCGTATCGGAATCAG
ATTGAAGCGCATGGACTCCCTCTTACACCTGAGTCATTGGCTTCCCTTCCACCTTTTACG
TCAATCACTTTTAATGCAGAAGATTCAATTGGAGAAAATCGGAAGCCTGAAGTTGCAAAA
ACTGGATTGGGGTCATCAGCAGCTATGACAACAGCAGTTGTTGCTGCTTTGCTTCATTAT
CTTGGTGTTGTTAATCTATCCTCTTTGACTGAGGATCAATCCCACGGAAGGAAAGATGCT
AGTAATCTTGATATTGTTCACGTGATAGCTCAAACTGCCCACTGCATTGCACAGGGTAAA
GTTGGCAGCGGGTTTGATGTTAGTTCTGCAGTTTATGGCAGCCAACGCTATGTGCGGTTT
TCACCTGAAGTGCTTTCTTCTGCTCAGAATGCAGGTATGGCAACACCACTAACAGAAGTC
ATTGATGATATCCTAAAAGCCAAGTGGGACCATGAGAGGACCAAGTTTTCATTGCCTCCA
TTGATGGCTCTATTACTTGGAGAACCAGGCAGTGGAGGATCTTCTACCCCATCAATGGTT
GGTGCTGTTAAGAGATGGCAGAAATCTGATCCTCAGAGTTCTCTAGAAACATGGAGAAAG
TTGTCAGAAGGAAACTCTGCCCTGGAAATGCACCTTAATACCTTATGTAAGTTGGCAGAA
AGGAACTATAATGTTTATGAATGCGTCATCAATGCCTGCAGCCTGCTTACTGCAGAAAAG
TGGCCTGAAAGAGCAAATGAACCAAGTCAAGCAGAAATTGTTAAAGAGTTATTAGGAGCC
CGAGAGGCCATGCTTGGAATCAGGTATTATATGCGTAAAATGGGAGAGGCTGCAGGAATT
CCGATAGAACCTGAATCACAAACTCACCTTCTGGATACAACGATGAGTATGGAGGGAGTT
CTGTTGGCTGGTGTTCCTGGTGCTGGTGGATTTGATGCAGTCTTTGCTGTCACTTTGGGG
GCTTCAAGCAAAAATGTCACAAAAGCTTGGAGTTCGCTCAATGTTCTTGCTATGCTAGTG
ACAGAAGATCCTCGTGGTGTGTCTTTGGAAGACAATGATCCTCGGGCAAAGGAAATCACT
GCAGCTGTTTCTGCAATCCAACTTCAGTAA

Peptide Sequence

PEP ID

XP_016468754.1
PEP Infomation

PREDICTED: phosphomevalonate kinase-like [Nicotiana tabacum]
Sequence

MAVVASAPGKVLMTGGYLVLERPNAGIVLSTNARFYAIVKPLYEEIKPESWAWAWADVKL
TSPQMARETMYKLSLKHLKLQAVSSSESRNPFVEHAVEYAIAAAHATFDKDKTDILQKLL
LRGLDITILGCNEFYSYRNQIEAHGLPLTPESLASLPPFTSITFNAEDSIGENRKPEVAK
TGLGSSAAMTTAVVAALLHYLGVVNLSSLTEDQSHGRKDASNLDIVHVIAQTAHCIAQGK
VGSGFDVSSAVYGSQRYVRFSPEVLSSAQNAGMATPLTEVIDDILKAKWDHERTKFSLPP
LMALLLGEPGSGGSSTPSMVGAVKRWQKSDPQSSLETWRKLSEGNSALEMHLNTLCKLAE
RNYNVYECVINACSLLTAEKWPERANEPSQAEIVKELLGAREAMLGIRYYMRKMGEAAGI
PIEPESQTHLLDTTMSMEGVLLAGVPGAGGFDAVFAVTLGASSKNVTKAWSSLNVLAMLV
TEDPRGVSLEDNDPRAKEITAAVSAIQLQ

Transcript Sequence

Gene sequence data has not been registered.